PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011070363.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family Dof
Protein Properties Length: 302aa    MW: 33057.7 Da    PI: 8.1169
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011070363.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.48.7e-403596263
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                    ke+al+cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrn+PvGgg+rknk+sss
  XP_011070363.1 35 KEQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSS 96
                    7899******************************************************9875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-252784IPR003851Zinc finger, Dof-type
PfamPF027019.5E-343793IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.1993993IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104177IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MDTAAQWPQD IVVKPMDEII TCSKPSVERK VRPQKEQALN CPRCNSTNTK FCYYNNYSLS  60
QPRYFCKTCR RYWTEGGSLR NIPVGGGSRK NKRSSSTTIN NNTSISLSSS SSNSSKKLPD  120
LVPQQNPNKI QAVVETSQDL NLGFSAHHHD FKALTEMIQV PNFDSSTKLE LQNPSSSSSA  180
NSLELLTGLP TATTTTRGLS SSFMAPLLPP VITTTDLNTV YSSGFPNLPD FKPSLNFSLD  240
GLGSNYGSFQ GLQESNGKLL FPFEDLKQVS SNTSTDAEHN RDHQQGADST GYWSGVMGGG  300
SW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0303325e-54KJ030332.1 Sesamum indicum clone TilSSR_1533 microsatellite sesame_1533 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070363.10.0PREDICTED: dof zinc finger protein DOF4.6
SwissprotQ8LAP89e-63DOF46_ARATH; Dof zinc finger protein DOF4.6
TrEMBLA0A068UV021e-108A0A068UV02_COFCA; Uncharacterized protein
STRINGVIT_02s0025g02250.t011e-105(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.13e-49Dof family protein